41 lines
805 B
Nix
41 lines
805 B
Nix
{
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description = "NEURON with custom mechanisms";
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inputs = {
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nixpkgs.url = "github:NixOS/nixpkgs";
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};
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outputs = { self, nixpkgs }:
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let
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system = "x86_64-linux";
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pkgs = import nixpkgs { inherit system; };
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python = pkgs.python3.withPackages (ps: with ps; [
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numpy
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pandas
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scipy
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]);
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in {
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devShells.${system}.default = pkgs.mkShell {
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packages = [
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pkgs.neuron
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python
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];
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shellHook = ''
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export MECH_DIR=$PWD/mech
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export NRN_NMODL_PATH=$MECH_DIR
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if [ ! -f "$MECH_DIR/x86_64/.libs/libnrnmech.so" ]; then
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echo "Compiling NEURON mechanisms..."
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nrnivmodl $MECH_DIR
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fi
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export NRNMECH_LIB_PATH=$MECH_DIR/x86_64/.libs/libnrnmech.so
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'';
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};
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};
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}
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